anima::LowMemoryPatientToGroupODFComparisonBridge Class Reference

#include <animaLowMemPatientToGroupODFComparisonBridge.h>

Public Types
typedef anima::ImageDataSplitter< InputImageType >	ImageSplitterODFType
typedef PatientToGroupODFComparisonImageFilter< double >::InputImageType	InputImageType
typedef anima::PatientToGroupODFComparisonImageFilter< double >	MainFilterType
typedef itk::Image< unsigned char, 3 >	MaskImageType
typedef PatientToGroupODFComparisonImageFilter< double >::OutputImageType	OutputImageType
typedef MainFilterType::TestType	TestType

Public Member Functions
void	BuildAndWrite (OutputImageType *tmpIm, std::string resName, OutputImageType::RegionType finalROI)
std::string	GetNameOfClass ()
	LowMemoryPatientToGroupODFComparisonBridge ()
void	SetComputationMask (std::string &cMask)
void	SetDataODFFileNames (std::string &fileList)
void	SetExplainedRatio (double eRatio)
void	SetNbSplits (unsigned int nbSplits)
void	SetNumberOfWorkUnits (unsigned int &nbT)
void	SetNumEigenValuesPCA (unsigned int numEigen)
void	SetOutputName (std::string &pref)
void	SetOutputPValName (std::string &pref)
void	SetSampleDirections (std::vector< std::vector< double > > &sampleDirections)
void	SetStatisticalTestType (TestType type)
void	SetTestODFFileName (std::string &fileName)
void	Update (int specificSplitToDo=-1, bool genOutputDescriptionData=false)
	~LowMemoryPatientToGroupODFComparisonBridge ()

Detailed Description

Definition at line 9 of file animaLowMemPatientToGroupODFComparisonBridge.h.

Member Typedef Documentation

ImageSplitterODFType

typedef anima::ImageDataSplitter< InputImageType > anima::LowMemoryPatientToGroupODFComparisonBridge::ImageSplitterODFType

Definition at line 15 of file animaLowMemPatientToGroupODFComparisonBridge.h.

InputImageType

typedef PatientToGroupODFComparisonImageFilter<double>::InputImageType anima::LowMemoryPatientToGroupODFComparisonBridge::InputImageType

Definition at line 12 of file animaLowMemPatientToGroupODFComparisonBridge.h.

MainFilterType

typedef anima::PatientToGroupODFComparisonImageFilter<double> anima::LowMemoryPatientToGroupODFComparisonBridge::MainFilterType

Definition at line 16 of file animaLowMemPatientToGroupODFComparisonBridge.h.

MaskImageType

typedef itk::Image<unsigned char,3> anima::LowMemoryPatientToGroupODFComparisonBridge::MaskImageType

Definition at line 18 of file animaLowMemPatientToGroupODFComparisonBridge.h.

OutputImageType

typedef PatientToGroupODFComparisonImageFilter<double>::OutputImageType anima::LowMemoryPatientToGroupODFComparisonBridge::OutputImageType

Definition at line 13 of file animaLowMemPatientToGroupODFComparisonBridge.h.

TestType

typedef MainFilterType::TestType anima::LowMemoryPatientToGroupODFComparisonBridge::TestType

Definition at line 17 of file animaLowMemPatientToGroupODFComparisonBridge.h.

Constructor & Destructor Documentation

LowMemoryPatientToGroupODFComparisonBridge()

anima::LowMemoryPatientToGroupODFComparisonBridge::LowMemoryPatientToGroupODFComparisonBridge

(

)

Definition at line 7 of file animaLowMemPatientToGroupODFComparisonBridge.cxx.

References anima::PatientToGroupComparisonImageFilter< PixelScalarType >::FISHER.

~LowMemoryPatientToGroupODFComparisonBridge()

anima::LowMemoryPatientToGroupODFComparisonBridge::~LowMemoryPatientToGroupODFComparisonBridge

(

)

Definition at line 24 of file animaLowMemPatientToGroupODFComparisonBridge.cxx.

Member Function Documentation

BuildAndWrite()

void anima::LowMemoryPatientToGroupODFComparisonBridge::BuildAndWrite	(	OutputImageType *	tmpIm,
		std::string	resName,
		OutputImageType::RegionType	finalROI
	)

Definition at line 170 of file animaLowMemPatientToGroupODFComparisonBridge.cxx.

Referenced by SetSampleDirections(), and Update().

GetNameOfClass()

std::string anima::LowMemoryPatientToGroupODFComparisonBridge::GetNameOfClass ( )

inline

Definition at line 23 of file animaLowMemPatientToGroupODFComparisonBridge.h.

References SetComputationMask().

SetComputationMask()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetComputationMask

(

std::string &

cMask

)

Definition at line 33 of file animaLowMemPatientToGroupODFComparisonBridge.cxx.

References anima::ImageDataSplitter< TInputImage >::SetComputationMask().

Referenced by GetNameOfClass(), and main().

SetDataODFFileNames()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetDataODFFileNames ( std::string &  fileList )

inline

Definition at line 27 of file animaLowMemPatientToGroupODFComparisonBridge.h.

References anima::ImageDataSplitter< TInputImage >::SetFileNames().

SetExplainedRatio()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetExplainedRatio ( double  eRatio )

inline

Definition at line 44 of file animaLowMemPatientToGroupODFComparisonBridge.h.

SetNbSplits()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetNbSplits ( unsigned int  nbSplits )

inline

Definition at line 40 of file animaLowMemPatientToGroupODFComparisonBridge.h.

SetNumberOfWorkUnits()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetNumberOfWorkUnits ( unsigned int &  nbT )

inline

Definition at line 41 of file animaLowMemPatientToGroupODFComparisonBridge.h.

SetNumEigenValuesPCA()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetNumEigenValuesPCA ( unsigned int  numEigen )

inline

Definition at line 45 of file animaLowMemPatientToGroupODFComparisonBridge.h.

SetOutputName()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetOutputName ( std::string &  pref )

inline

Definition at line 37 of file animaLowMemPatientToGroupODFComparisonBridge.h.

SetOutputPValName()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetOutputPValName ( std::string &  pref )

inline

Definition at line 38 of file animaLowMemPatientToGroupODFComparisonBridge.h.

SetSampleDirections()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetSampleDirections ( std::vector< std::vector< double > > &  sampleDirections )

inline

Definition at line 47 of file animaLowMemPatientToGroupODFComparisonBridge.h.

References BuildAndWrite(), and Update().

SetStatisticalTestType()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetStatisticalTestType ( TestType  type )

inline

Definition at line 43 of file animaLowMemPatientToGroupODFComparisonBridge.h.

SetTestODFFileName()

void anima::LowMemoryPatientToGroupODFComparisonBridge::SetTestODFFileName ( std::string &  fileName )

inline

Definition at line 32 of file animaLowMemPatientToGroupODFComparisonBridge.h.

References anima::ImageDataSplitter< TInputImage >::SetUniqueFileName().

Update()

void anima::LowMemoryPatientToGroupODFComparisonBridge::Update	(	int	specificSplitToDo = -1,
		bool	genOutputDescriptionData = false
	)

Definition at line 41 of file animaLowMemPatientToGroupODFComparisonBridge.cxx.

References BuildAndWrite(), anima::ImageDataSplitter< TInputImage >::EmptyMask(), anima::ImageDataSplitter< TInputImage >::GetBlockRegionInsideMargin(), anima::ImageDataSplitter< TInputImage >::GetNbImages(), anima::ImageDataSplitter< TInputImage >::GetOutput(), anima::ImageDataSplitter< TInputImage >::GetSmallMaskWithMargin(), anima::ImageDataSplitter< TInputImage >::GetSpecificBlockRegion(), anima::PatientToGroupODFComparisonImageFilter< PixelScalarType >::New(), anima::ImageDataSplitter< TInputImage >::SetBlockIndex(), anima::ImageDataSplitter< TInputImage >::SetNumberOfBlocks(), and anima::ImageDataSplitter< TInputImage >::Update().

Referenced by SetSampleDirections().

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The documentation for this class was generated from the following files:

• animaLowMemPatientToGroupODFComparisonBridge.h
• animaLowMemPatientToGroupODFComparisonBridge.cxx