ANIMA  4.0
Public Types | Public Member Functions | Protected Member Functions | List of all members
anima::BaseTransformAgregator< NDimensions > Class Template Referenceabstract

#include <animaBaseTransformAgregator.h>

+ Inheritance diagram for anima::BaseTransformAgregator< NDimensions >:

Public Types

typedef BaseInputTransformType::Pointer BaseInputTransformPointer
 
typedef itk::Transform< InternalScalarType, NDimensions, NDimensions > BaseInputTransformType
 
typedef itk::Transform< ScalarType, NDimensions, NDimensions > BaseOutputTransformType
 
typedef double InternalScalarType
 
typedef itk::Matrix< ScalarType, NDimensions, NDimensions > MatrixType
 
typedef itk::Point< InternalScalarType, NDimensions > PointType
 
typedef itk::ImageRegion< NDimensions > RegionType
 
typedef double ScalarType
 
enum  TRANSFORM_TYPE {
  TRANSLATION,
  RIGID,
  ANISOTROPIC_SIM,
  AFFINE,
  DIRECTIONAL_AFFINE,
  SVF
}
 

Public Member Functions

 BaseTransformAgregator ()
 
BaseInputTransformPointer & GetCurrentLinearTransform ()
 
virtual PointType GetEstimationBarycenter ()
 
PointType & GetInputOrigin (unsigned int i)
 
std::vector< PointType > & GetInputOrigins ()
 
std::vector< RegionType > & GetInputRegions ()
 
BaseInputTransformType * GetInputTransform (unsigned int i)
 
std::vector< BaseInputTransformPointer > & GetInputTransforms ()
 
TRANSFORM_TYPE GetInputTransformType ()
 
InternalScalarType GetInputWeight (unsigned int i)
 
std::vector< InternalScalarType > & GetInputWeights ()
 
MatrixType & GetOrthogonalDirectionMatrix ()
 
BaseOutputTransformType * GetOutput ()
 
TRANSFORM_TYPE GetOutputTransformType ()
 
bool GetVerboseAgregation ()
 
void SetCurrentLinearTransform (BaseInputTransformPointer &inputTransforms)
 
void SetInputOrigins (const std::vector< PointType > &inputOrigins)
 
void SetInputRegions (const std::vector< RegionType > &inputRegions)
 
void SetInputTransforms (std::vector< BaseInputTransformPointer > &inputTransforms)
 
void SetInputTransformType (TRANSFORM_TYPE name)
 
void SetInputWeight (unsigned int i, double w)
 
void SetInputWeights (const std::vector< InternalScalarType > &weights)
 
void SetOrthogonalDirectionMatrix (const MatrixType &inputTransforms)
 
void SetOutputTransformType (TRANSFORM_TYPE name)
 
void SetUpToDate (bool value)
 
void SetVerboseAgregation (bool value)
 
virtual bool Update ()=0
 
virtual ~BaseTransformAgregator ()
 

Protected Member Functions

void SetOutput (BaseOutputTransformType *output)
 

Detailed Description

template<unsigned int NDimensions = 3>
class anima::BaseTransformAgregator< NDimensions >

Definition at line 16 of file animaBaseTransformAgregator.h.

Member Typedef Documentation

◆ BaseInputTransformPointer

template<unsigned int NDimensions = 3>
typedef BaseInputTransformType::Pointer anima::BaseTransformAgregator< NDimensions >::BaseInputTransformPointer

Definition at line 22 of file animaBaseTransformAgregator.h.

◆ BaseInputTransformType

template<unsigned int NDimensions = 3>
typedef itk::Transform<InternalScalarType,NDimensions,NDimensions> anima::BaseTransformAgregator< NDimensions >::BaseInputTransformType

Definition at line 21 of file animaBaseTransformAgregator.h.

◆ BaseOutputTransformType

template<unsigned int NDimensions = 3>
typedef itk::Transform<ScalarType,NDimensions,NDimensions> anima::BaseTransformAgregator< NDimensions >::BaseOutputTransformType

Definition at line 23 of file animaBaseTransformAgregator.h.

◆ InternalScalarType

template<unsigned int NDimensions = 3>
typedef double anima::BaseTransformAgregator< NDimensions >::InternalScalarType

Definition at line 20 of file animaBaseTransformAgregator.h.

◆ MatrixType

template<unsigned int NDimensions = 3>
typedef itk::Matrix<ScalarType,NDimensions,NDimensions> anima::BaseTransformAgregator< NDimensions >::MatrixType

Definition at line 26 of file animaBaseTransformAgregator.h.

◆ PointType

template<unsigned int NDimensions = 3>
typedef itk::Point<InternalScalarType,NDimensions> anima::BaseTransformAgregator< NDimensions >::PointType

Definition at line 24 of file animaBaseTransformAgregator.h.

◆ RegionType

template<unsigned int NDimensions = 3>
typedef itk::ImageRegion<NDimensions> anima::BaseTransformAgregator< NDimensions >::RegionType

Definition at line 25 of file animaBaseTransformAgregator.h.

◆ ScalarType

template<unsigned int NDimensions = 3>
typedef double anima::BaseTransformAgregator< NDimensions >::ScalarType

Definition at line 19 of file animaBaseTransformAgregator.h.

Member Enumeration Documentation

◆ TRANSFORM_TYPE

template<unsigned int NDimensions = 3>
enum anima::BaseTransformAgregator::TRANSFORM_TYPE
Enumerator
TRANSLATION 
RIGID 
ANISOTROPIC_SIM 
AFFINE 
DIRECTIONAL_AFFINE 
SVF 

Definition at line 28 of file animaBaseTransformAgregator.h.

Constructor & Destructor Documentation

◆ BaseTransformAgregator()

template<unsigned int NDimensions>
anima::BaseTransformAgregator< NDimensions >::BaseTransformAgregator ( )

Definition at line 9 of file animaBaseTransformAgregator.hxx.

◆ ~BaseTransformAgregator()

template<unsigned int NDimensions>
anima::BaseTransformAgregator< NDimensions >::~BaseTransformAgregator ( )
virtual

Definition at line 26 of file animaBaseTransformAgregator.hxx.

Member Function Documentation

◆ GetCurrentLinearTransform()

template<unsigned int NDimensions = 3>
BaseInputTransformPointer& anima::BaseTransformAgregator< NDimensions >::GetCurrentLinearTransform ( )
inline

Definition at line 47 of file animaBaseTransformAgregator.h.

References anima::BaseTransformAgregator< NDimensions >::SetOrthogonalDirectionMatrix().

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), and anima::LTSWTransformAgregator< NDimensions >::Update().

◆ GetEstimationBarycenter()

template<unsigned int NDimensions = 3>
virtual PointType anima::BaseTransformAgregator< NDimensions >::GetEstimationBarycenter ( )
inlinevirtual

Reimplemented in anima::LTSWTransformAgregator< NDimensions >, anima::LSWTransformAgregator< NDimensions >, and anima::MEstTransformAgregator< NDimensions >.

Definition at line 91 of file animaBaseTransformAgregator.h.

◆ GetInputOrigin()

template<unsigned int NDimensions = 3>
PointType& anima::BaseTransformAgregator< NDimensions >::GetInputOrigin ( unsigned int  i)
inline

Definition at line 67 of file animaBaseTransformAgregator.h.

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), anima::LTSWTransformAgregator< NDimensions >::Update(), anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ GetInputOrigins()

template<unsigned int NDimensions = 3>
std::vector<PointType>& anima::BaseTransformAgregator< NDimensions >::GetInputOrigins ( )
inline

Definition at line 66 of file animaBaseTransformAgregator.h.

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), and anima::LTSWTransformAgregator< NDimensions >::Update().

◆ GetInputRegions()

template<unsigned int NDimensions = 3>
std::vector<RegionType>& anima::BaseTransformAgregator< NDimensions >::GetInputRegions ( )
inline

Definition at line 65 of file animaBaseTransformAgregator.h.

Referenced by anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ GetInputTransform()

template<unsigned int NDimensions = 3>
BaseInputTransformType* anima::BaseTransformAgregator< NDimensions >::GetInputTransform ( unsigned int  i)
inline

Definition at line 43 of file animaBaseTransformAgregator.h.

References anima::BaseTransformAgregator< NDimensions >::SetCurrentLinearTransform().

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), anima::LTSWTransformAgregator< NDimensions >::Update(), anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ GetInputTransforms()

template<unsigned int NDimensions = 3>
std::vector<BaseInputTransformPointer>& anima::BaseTransformAgregator< NDimensions >::GetInputTransforms ( )
inline

Definition at line 42 of file animaBaseTransformAgregator.h.

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), anima::LTSWTransformAgregator< NDimensions >::Update(), anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ GetInputTransformType()

template<unsigned int NDimensions = 3>
TRANSFORM_TYPE anima::BaseTransformAgregator< NDimensions >::GetInputTransformType ( )
inline

Definition at line 93 of file animaBaseTransformAgregator.h.

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), anima::LTSWTransformAgregator< NDimensions >::Update(), anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ GetInputWeight()

template<unsigned int NDimensions = 3>
InternalScalarType anima::BaseTransformAgregator< NDimensions >::GetInputWeight ( unsigned int  i)
inline

Definition at line 76 of file animaBaseTransformAgregator.h.

Referenced by anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ GetInputWeights()

template<unsigned int NDimensions = 3>
std::vector<InternalScalarType>& anima::BaseTransformAgregator< NDimensions >::GetInputWeights ( )
inline

Definition at line 75 of file animaBaseTransformAgregator.h.

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), anima::LTSWTransformAgregator< NDimensions >::Update(), anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ GetOrthogonalDirectionMatrix()

template<unsigned int NDimensions = 3>
MatrixType& anima::BaseTransformAgregator< NDimensions >::GetOrthogonalDirectionMatrix ( )
inline

Definition at line 51 of file animaBaseTransformAgregator.h.

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), and anima::LTSWTransformAgregator< NDimensions >::Update().

◆ GetOutput()

template<unsigned int NDimensions>
BaseTransformAgregator< NDimensions >::BaseOutputTransformType * anima::BaseTransformAgregator< NDimensions >::GetOutput ( )

Definition at line 67 of file animaBaseTransformAgregator.hxx.

Referenced by anima::BaseTransformAgregator< NDimensions >::GetOutputTransformType().

◆ GetOutputTransformType()

template<unsigned int NDimensions = 3>
TRANSFORM_TYPE anima::BaseTransformAgregator< NDimensions >::GetOutputTransformType ( )
inline

Definition at line 94 of file animaBaseTransformAgregator.h.

References anima::BaseTransformAgregator< NDimensions >::GetOutput(), anima::BaseTransformAgregator< NDimensions >::SetOutput(), and anima::BaseTransformAgregator< NDimensions >::Update().

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), anima::LTSWTransformAgregator< NDimensions >::Update(), anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ GetVerboseAgregation()

template<unsigned int NDimensions = 3>
bool anima::BaseTransformAgregator< NDimensions >::GetVerboseAgregation ( )
inline

Definition at line 89 of file animaBaseTransformAgregator.h.

Referenced by anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ SetCurrentLinearTransform()

template<unsigned int NDimensions>
void anima::BaseTransformAgregator< NDimensions >::SetCurrentLinearTransform ( BaseInputTransformPointer &  inputTransforms)

Definition at line 101 of file animaBaseTransformAgregator.hxx.

Referenced by anima::BaseTransformAgregator< NDimensions >::GetInputTransform().

◆ SetInputOrigins()

template<unsigned int NDimensions = 3>
void anima::BaseTransformAgregator< NDimensions >::SetInputOrigins ( const std::vector< PointType > &  inputOrigins)
inline

Definition at line 53 of file animaBaseTransformAgregator.h.

◆ SetInputRegions()

template<unsigned int NDimensions = 3>
void anima::BaseTransformAgregator< NDimensions >::SetInputRegions ( const std::vector< RegionType > &  inputRegions)
inline

Definition at line 59 of file animaBaseTransformAgregator.h.

◆ SetInputTransforms()

template<unsigned int NDimensions>
void anima::BaseTransformAgregator< NDimensions >::SetInputTransforms ( std::vector< BaseInputTransformPointer > &  inputTransforms)

Definition at line 90 of file animaBaseTransformAgregator.hxx.

◆ SetInputTransformType()

template<unsigned int NDimensions>
void anima::BaseTransformAgregator< NDimensions >::SetInputTransformType ( TRANSFORM_TYPE  name)

Definition at line 33 of file animaBaseTransformAgregator.hxx.

Referenced by anima::BaseTransformAgregator< NDimensions >::SetInputWeight().

◆ SetInputWeight()

template<unsigned int NDimensions = 3>
void anima::BaseTransformAgregator< NDimensions >::SetInputWeight ( unsigned int  i,
double  w 
)
inline

Definition at line 77 of file animaBaseTransformAgregator.h.

References anima::BaseTransformAgregator< NDimensions >::SetInputTransformType(), and anima::BaseTransformAgregator< NDimensions >::SetOutputTransformType().

Referenced by anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), and anima::LTSWTransformAgregator< NDimensions >::Update().

◆ SetInputWeights()

template<unsigned int NDimensions = 3>
void anima::BaseTransformAgregator< NDimensions >::SetInputWeights ( const std::vector< InternalScalarType > &  weights)
inline

Definition at line 69 of file animaBaseTransformAgregator.h.

◆ SetOrthogonalDirectionMatrix()

template<unsigned int NDimensions>
void anima::BaseTransformAgregator< NDimensions >::SetOrthogonalDirectionMatrix ( const MatrixType &  inputTransforms)

Definition at line 111 of file animaBaseTransformAgregator.hxx.

Referenced by anima::BaseTransformAgregator< NDimensions >::GetCurrentLinearTransform().

◆ SetOutput()

template<unsigned int NDimensions>
void anima::BaseTransformAgregator< NDimensions >::SetOutput ( BaseOutputTransformType *  output)
protected

Definition at line 82 of file animaBaseTransformAgregator.hxx.

Referenced by anima::BaseTransformAgregator< NDimensions >::GetOutputTransformType(), anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), anima::LTSWTransformAgregator< NDimensions >::Update(), anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ SetOutputTransformType()

template<unsigned int NDimensions>
void anima::BaseTransformAgregator< NDimensions >::SetOutputTransformType ( TRANSFORM_TYPE  name)

Definition at line 50 of file animaBaseTransformAgregator.hxx.

Referenced by anima::BaseTransformAgregator< NDimensions >::SetInputWeight(), anima::PyramidalDistortionCorrectionBlockMatchingBridge< ImageDimension >::Update(), anima::PyramidalDenseSVFMatchingBridge< ImageDimension >::Update(), anima::PyramidalDenseTensorSVFMatchingBridge< ImageDimension >::Update(), and anima::PyramidalDenseMCMSVFMatchingBridge< ImageDimension >::Update().

◆ SetUpToDate()

template<unsigned int NDimensions = 3>
void anima::BaseTransformAgregator< NDimensions >::SetUpToDate ( bool  value)
inline

Definition at line 86 of file animaBaseTransformAgregator.h.

Referenced by anima::MEstTransformAgregator< NDimensions >::SeStoppingThreshold(), anima::MEstTransformAgregator< NDimensions >::SetMEstimateFactor(), anima::LSWTransformAgregator< NDimensions >::Update(), anima::MEstTransformAgregator< NDimensions >::Update(), anima::LTSWTransformAgregator< NDimensions >::Update(), anima::BalooSVFTransformAgregator< NDimensions >::Update(), and anima::DenseSVFTransformAgregator< NDimensions >::Update().

◆ SetVerboseAgregation()

template<unsigned int NDimensions = 3>
void anima::BaseTransformAgregator< NDimensions >::SetVerboseAgregation ( bool  value)
inline

Definition at line 88 of file animaBaseTransformAgregator.h.

Referenced by anima::PyramidalDenseSVFMatchingBridge< ImageDimension >::Update().

◆ Update()

template<unsigned int NDimensions = 3>
virtual bool anima::BaseTransformAgregator< NDimensions >::Update ( )
pure virtual

Implemented in anima::DenseSVFTransformAgregator< NDimensions >, anima::BalooSVFTransformAgregator< NDimensions >, anima::LTSWTransformAgregator< NDimensions >, anima::LSWTransformAgregator< NDimensions >, and anima::MEstTransformAgregator< NDimensions >.

Referenced by anima::BaseTransformAgregator< NDimensions >::GetOutputTransformType().

The documentation for this class was generated from the following files:
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