#include <animaAnatomicalBlockMatcher.h>

Inheritance diagram for anima::AnatomicalBlockMatcher< TInputImageType >:

Collaboration diagram for anima::AnatomicalBlockMatcher< TInputImageType >:

Public Types
typedef Superclass::AgregatorType	AgregatorType

typedef Superclass::BaseInputTransformPointer	BaseInputTransformPointer

typedef Superclass::InputImageType	InputImageType

typedef Superclass::MetricPointer	MetricPointer

typedef Superclass::OptimizerPointer	OptimizerPointer

typedef Superclass::PointType	PointType

enum	SimilarityDefinition { MeanSquares = 0, Correlation, SquaredCorrelation }

typedef BaseAffineBlockMatcher< TInputImageType >	Superclass

Public Types inherited from anima::BaseAffineBlockMatcher< TInputImageType >
typedef Superclass::AgregatorType	AgregatorType

typedef Superclass::BaseInputTransformPointer	BaseInputTransformPointer

typedef Superclass::InputImageType	InputImageType

typedef Superclass::MetricPointer	MetricPointer

typedef Superclass::OptimizerPointer	OptimizerPointer

typedef Superclass::PointType	PointType

typedef BaseBlockMatcher< TInputImageType >	Superclass

enum	TransformDefinition { Translation = 0, Rigid, Affine, Directional_Affine }

Public Types inherited from anima::BaseBlockMatcher< TInputImageType >
typedef anima::BaseTransformAgregator< TInputImageType::ImageDimension >	AgregatorType

typedef BaseInputTransformType::Pointer	BaseInputTransformPointer

typedef AgregatorType::BaseInputTransformType	BaseInputTransformType

typedef InputImageType::RegionType	ImageRegionType

typedef InputImageType::Pointer	InputImagePointer

typedef TInputImageType	InputImageType

typedef AgregatorType::InternalScalarType	InternalScalarType

typedef MaskImageType::Pointer	MaskImagePointer

typedef itk::Image< unsigned char, TInputImageType::ImageDimension >	MaskImageType

typedef MetricType::Pointer	MetricPointer

typedef itk::SingleValuedCostFunction	MetricType

enum	OptimizerDefinition { Exhaustive = 0, Bobyqa }

typedef OptimizerType::Pointer	OptimizerPointer

typedef itk::SingleValuedNonLinearOptimizer	OptimizerType

typedef InputImageType::PointType	PointType

typedef BaseBlockMatcher	Self

Public Member Functions
	AnatomicalBlockMatcher ()

bool	GetMaximizedMetric ()

void	SetDefaultBackgroundValue (double val)

void	SetSimilarityType (SimilarityDefinition val)

virtual	~AnatomicalBlockMatcher ()

Public Member Functions inherited from anima::BaseAffineBlockMatcher< TInputImageType >
	BaseAffineBlockMatcher ()

AgregatorType::TRANSFORM_TYPE	GetAgregatorInputTransformType ()

TransformDefinition &	GetBlockTransformType ()

void	SetAffineDirection (unsigned int val)

void	SetAngleMax (double val)

void	SetBlockTransformType (TransformDefinition val)

void	SetScaleMax (double val)

void	SetSearchAngleRadius (double val)

void	SetSearchScaleRadius (double val)

void	SetTranslateMax (double val)

virtual	~BaseAffineBlockMatcher ()

Public Member Functions inherited from anima::BaseBlockMatcher< TInputImageType >
	BaseBlockMatcher ()

MaskImagePointer &	GetBlockGenerationMask ()

double	GetBlockPercentageKept ()

std::vector< PointType > &	GetBlockPositions ()

ImageRegionType &	GetBlockRegion (unsigned int i)

std::vector< ImageRegionType > &	GetBlockRegions ()

unsigned int	GetBlockSize ()

unsigned int	GetBlockSpacing ()

BaseInputTransformPointer &	GetBlockTransformPointer (unsigned int i)

std::vector< BaseInputTransformPointer > &	GetBlockTransformPointers ()

double	GetBlockVarianceThreshold ()

const std::vector< double > &	GetBlockWeights ()

InputImagePointer &	GetMovingImage ()

unsigned int	GetNumberOfWorkUnits ()

OptimizerDefinition	GetOptimizerType ()

InputImagePointer &	GetReferenceImage ()

double	GetSearchRadius ()

bool	GetVerbose ()

void	SetBlockGenerationMask (MaskImageType *image)

void	SetBlockPercentageKept (double val)

void	SetBlockSize (unsigned int val)

void	SetBlockSpacing (unsigned int val)

void	SetBlockVarianceThreshold (double val)

void	SetFinalRadius (double val)

void	SetForceComputeBlocks (bool val)

void	SetMovingImage (InputImageType *image)

void	SetNumberOfWorkUnits (unsigned int val)

void	SetOptimizerMaximumIterations (unsigned int val)

void	SetOptimizerType (OptimizerDefinition val)

void	SetReferenceImage (InputImageType *image)

void	SetSearchRadius (double val)

void	SetStepSize (double val)

void	SetVerbose (bool value)

void	Update ()

virtual	~BaseBlockMatcher ()

Protected Member Functions
virtual void	BlockMatchingSetup (MetricPointer &metric, unsigned int block)

virtual double	ComputeBlockWeight (double val, unsigned int block)

virtual MetricPointer	SetupMetric ()

Protected Member Functions inherited from anima::BaseAffineBlockMatcher< TInputImageType >
virtual void	BlockMatchingSetup (MetricPointer &metric, unsigned int block)

virtual BaseInputTransformPointer	GetNewBlockTransform (PointType &blockCenter)

virtual void	TransformDependantOptimizerSetup (OptimizerPointer &optimizer)

Protected Member Functions inherited from anima::BaseBlockMatcher< TInputImageType >
void	BlockMatch (unsigned int startIndex, unsigned int endIndex)

virtual void	InitializeBlocks ()

void	ProcessBlockMatch ()

void	SetBlockPositions (std::vector< PointType > &val)

void	SetBlockRegions (std::vector< ImageRegionType > &val)

void	SetBlockWeights (std::vector< double > &val)

virtual OptimizerPointer	SetupOptimizer ()

Additional Inherited Members
Static Protected Member Functions inherited from anima::BaseBlockMatcher< TInputImageType >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	ThreadedMatching (void *arg)