ANIMA
4.0
|
Public Attributes | |
std::string | axis |
std::string | base |
bool | displayInfo |
unsigned int | exponentiationOrder |
bool | fileList |
bool | full |
bool | gaussianNoise |
std::string | geometry |
std::string | gradientFileName |
itk::ImageIOBase::Pointer | imageIO |
std::string | input |
std::vector< std::string > | inputs |
std::string | interpolation |
bool | invert |
std::string | mask |
std::string | maskName |
double | min |
std::string | moving |
unsigned int | nbComponents |
unsigned int | nlevels |
unsigned int | npoints |
unsigned int | nreplicates |
unsigned int | nthreads |
double | origin |
std::string | output |
unsigned int | pthread |
std::string | reference |
std::string | refName |
std::string | reorient |
std::string | resName |
double | sigma |
std::string | space |
double | spacing |
int | tindex |
std::string | transfo |
int | tsize |
int | xindex |
int | xsize |
int | yindex |
int | ysize |
int | zindex |
int | zsize |
Definition at line 14 of file animaFlipTensors.cxx.
std::string arguments::axis |
Definition at line 16 of file animaFlipTensors.cxx.
Referenced by flipTensors(), and main().
std::string arguments::base |
Definition at line 12 of file animaConcatenateImages.cxx.
Referenced by concatenate(), and main().
bool arguments::displayInfo |
Definition at line 14 of file animaConvertImage.cxx.
Referenced by main().
unsigned int arguments::exponentiationOrder |
Definition at line 25 of file animaApplyTransformSerie.cxx.
Referenced by applyScalarTransfo(), applyScalarTransfo4D(), applyTransformationToGradients(), applyVectorTransfo(), and main().
bool arguments::fileList |
Definition at line 12 of file animaVectorizeImages.cxx.
Referenced by main(), and vectorize().
bool arguments::full |
Definition at line 16 of file animaConnectedComponents.cxx.
Referenced by connectedComponent(), and main().
bool arguments::gaussianNoise |
Definition at line 12 of file animaNoiseGenerator.cxx.
Referenced by addNoise(), and main().
std::string arguments::geometry |
Definition at line 27 of file animaApplyTransformSerie.cxx.
Referenced by main().
std::string arguments::gradientFileName |
Definition at line 13 of file animaConvertImage.cxx.
itk::ImageIOBase::Pointer arguments::imageIO |
Definition at line 15 of file animaMaskImage.cxx.
Referenced by main(), maskScalar4DImage(), retrieveComponentType(), and retrieveNbDimensions().
std::string arguments::input |
Definition at line 16 of file animaFlipTensors.cxx.
Referenced by addNoise(), applyScalarTransfo(), applyScalarTransfo4D(), applyVectorTransfo(), collapse(), concatenate(), connectedComponent(), convert(), extract(), flipTensors(), and main().
std::vector< std::string > arguments::inputs |
Definition at line 11 of file animaConcatenateImages.cxx.
Referenced by concatenate(), main(), and vectorize().
std::string arguments::interpolation |
Definition at line 27 of file animaApplyTransformSerie.cxx.
Referenced by applyScalarTransfo(), applyScalarTransfo4D(), applyVectorTransfo(), and main().
bool arguments::invert |
Definition at line 24 of file animaApplyTransformSerie.cxx.
Referenced by applyScalarTransfo(), applyScalarTransfo4D(), applyTransformationToGradients(), applyVectorTransfo(), and main().
std::string arguments::mask |
Definition at line 16 of file animaFlipTensors.cxx.
Referenced by flipTensors(), and main().
std::string arguments::maskName |
Definition at line 14 of file animaMaskImage.cxx.
Referenced by main(), mask3DImage(), and maskScalar4DImage().
double arguments::min |
Definition at line 15 of file animaConnectedComponents.cxx.
Referenced by connectedComponent(), and main().
std::string arguments::moving |
Definition at line 10 of file animaNyulStandardization.cxx.
Referenced by main(), and standardize().
unsigned int arguments::nbComponents |
Definition at line 14 of file animaConcatenateImages.cxx.
Referenced by concatenate(), retrieveNbComponent(), and vectorize().
unsigned int arguments::nlevels |
Definition at line 11 of file animaNyulStandardization.cxx.
Referenced by main(), and standardize().
unsigned int arguments::npoints |
Definition at line 11 of file animaNyulStandardization.cxx.
Referenced by main(), and standardize().
unsigned int arguments::nreplicates |
Definition at line 11 of file animaNoiseGenerator.cxx.
Referenced by addNoise(), and main().
unsigned int arguments::nthreads |
Definition at line 17 of file animaFlipTensors.cxx.
Referenced by addNoise(), flipTensors(), main(), and standardize().
double arguments::origin |
Definition at line 14 of file animaCollapseImage.cxx.
Referenced by applyScalarTransfo(), applyScalarTransfo4D(), applyVectorTransfo(), collapse(), concatenate(), and main().
std::string arguments::output |
Definition at line 16 of file animaFlipTensors.cxx.
Referenced by addNoise(), applyScalarTransfo(), applyScalarTransfo4D(), applyVectorTransfo(), collapse(), concatenate(), connectedComponent(), convert(), extract(), flipTensors(), main(), standardize(), and vectorize().
unsigned int arguments::pthread |
Definition at line 26 of file animaApplyTransformSerie.cxx.
Referenced by applyScalarTransfo(), applyScalarTransfo4D(), applyTransformationToGradients(), applyVectorTransfo(), connectedComponent(), and main().
std::string arguments::reference |
Definition at line 10 of file animaNyulStandardization.cxx.
Referenced by main(), and standardize().
std::string arguments::refName |
Definition at line 14 of file animaMaskImage.cxx.
Referenced by main(), mask3DImage(), and maskScalar4DImage().
std::string arguments::reorient |
Definition at line 12 of file animaConvertImage.cxx.
std::string arguments::resName |
Definition at line 14 of file animaMaskImage.cxx.
Referenced by main(), mask3DImage(), and maskScalar4DImage().
double arguments::sigma |
Definition at line 10 of file animaNoiseGenerator.cxx.
Referenced by addNoise(), and main().
std::string arguments::space |
Definition at line 12 of file animaConvertImage.cxx.
double arguments::spacing |
Definition at line 14 of file animaCollapseImage.cxx.
Referenced by applyScalarTransfo(), applyScalarTransfo4D(), applyVectorTransfo(), collapse(), concatenate(), connectedComponent(), and main().
int arguments::tindex |
Definition at line 20 of file animaCropImage.cxx.
std::string arguments::transfo |
Definition at line 27 of file animaApplyTransformSerie.cxx.
Referenced by applyScalarTransfo(), applyScalarTransfo4D(), applyTransformationToGradients(), applyVectorTransfo(), and main().
int arguments::tsize |
Definition at line 20 of file animaCropImage.cxx.
Referenced by evaluateOutputType(), extract(), and main().
int arguments::xindex |
Definition at line 20 of file animaCropImage.cxx.
int arguments::xsize |
Definition at line 20 of file animaCropImage.cxx.
Referenced by evaluateOutputType(), extract(), and main().
int arguments::yindex |
Definition at line 20 of file animaCropImage.cxx.
int arguments::ysize |
Definition at line 20 of file animaCropImage.cxx.
Referenced by evaluateOutputType(), extract(), and main().
int arguments::zindex |
Definition at line 20 of file animaCropImage.cxx.
int arguments::zsize |
Definition at line 20 of file animaCropImage.cxx.
Referenced by evaluateOutputType(), extract(), and main().