ANIMA
4.0
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Tensor correlation similarity measure as defined by Taquet et al. More...
#include <animaTensorCorrelationImageToImageMetric.h>
Public Types | |
typedef itk::SmartPointer< const Self > | ConstPointer |
typedef itk::ContinuousIndex< double, ImageDimension > | ContinuousIndexType |
typedef Superclass::CoordinateRepresentationType | CoordinateRepresentationType |
typedef Superclass::FixedImageConstPointer | FixedImageConstPointer |
typedef Superclass::FixedImageType | FixedImageType |
typedef Superclass::InputPointType | InputPointType |
typedef Superclass::MeasureType | MeasureType |
typedef Superclass::MovingImageConstPointer | MovingImageConstPointer |
typedef Superclass::MovingImageType | MovingImageType |
typedef Superclass::OutputPointType | OutputPointType |
typedef TFixedImage::PixelType | PixelType |
typedef itk::SmartPointer< Self > | Pointer |
typedef TensorCorrelationImageToImageMetric | Self |
typedef BaseOrientedModelImageToImageMetric< TFixedImage, TMovingImage > | Superclass |
typedef itk::VectorImage< TFixedImagePixelType, ImageDimension > | TFixedImage |
typedef itk::VectorImage< TMovingImagePixelType, ImageDimension > | TMovingImage |
typedef Superclass::TransformParametersType | TransformParametersType |
typedef Superclass::TransformPointer | TransformPointer |
typedef Superclass::TransformType | TransformType |
Public Types inherited from anima::BaseOrientedModelImageToImageMetric< itk::VectorImage< TFixedImagePixelType, ImageDimension >, itk::VectorImage< TMovingImagePixelType, ImageDimension > > | |
typedef itk::SmartPointer< const Self > | ConstPointer |
typedef Superclass::ParametersValueType | CoordinateRepresentationType |
typedef Superclass::DerivativeType | DerivativeType |
typedef FixedImageType::ConstPointer | FixedImageConstPointer |
typedef FixedImageMaskType::ConstPointer | FixedImageMaskConstPointer |
typedef FixedImageMaskType::Pointer | FixedImageMaskPointer |
typedef itk::SpatialObject< itkGetStaticConstMacro(FixedImageDimension) > | FixedImageMaskType |
typedef FixedImageType::RegionType | FixedImageRegionType |
typedef itk::VectorImage< TFixedImagePixelType, ImageDimension > | FixedImageType |
typedef TransformType::InputPointType | InputPointType |
typedef InterpolatorType::Pointer | InterpolatorPointer |
typedef itk::InterpolateImageFunction< MovingImageType, CoordinateRepresentationType > | InterpolatorType |
typedef Superclass::MeasureType | MeasureType |
enum | ModelReorientationType |
typedef MovingImageType::ConstPointer | MovingImageConstPointer |
typedef MovingImageMaskType::ConstPointer | MovingImageMaskConstPointer |
typedef MovingImageMaskType::Pointer | MovingImageMaskPointer |
typedef itk::SpatialObject< itkGetStaticConstMacro(MovingImageDimension) > | MovingImageMaskType |
typedef itk::VectorImage< TMovingImagePixelType, ImageDimension > ::PixelType | MovingImagePixelType |
typedef itk::VectorImage< TMovingImagePixelType, ImageDimension > | MovingImageType |
typedef TransformType::OutputPointType | OutputPointType |
typedef Superclass::ParametersType | ParametersType |
typedef itk::SmartPointer< Self > | Pointer |
typedef double | RealType |
typedef BaseOrientedModelImageToImageMetric | Self |
typedef itk::SingleValuedCostFunction | Superclass |
typedef TransformType::JacobianType | TransformJacobianType |
typedef TransformType::ParametersType | TransformParametersType |
typedef TransformType::Pointer | TransformPointer |
typedef itk::Transform< CoordinateRepresentationType, itkGetStaticConstMacro(MovingImageDimension), itkGetStaticConstMacro(FixedImageDimension)> | TransformType |
Static Public Member Functions | |
static Pointer | New () |
Protected Member Functions | |
TensorCorrelationImageToImageMetric () | |
virtual | ~TensorCorrelationImageToImageMetric () |
Protected Member Functions inherited from anima::BaseOrientedModelImageToImageMetric< itk::VectorImage< TFixedImagePixelType, ImageDimension >, itk::VectorImage< TMovingImagePixelType, ImageDimension > > | |
BaseOrientedModelImageToImageMetric () | |
void | PrintSelf (std::ostream &os, itk::Indent indent) const ITK_OVERRIDE |
virtual | ~BaseOrientedModelImageToImageMetric () |
Additional Inherited Members | |
Static Public Attributes inherited from anima::BaseOrientedModelImageToImageMetric< itk::VectorImage< TFixedImagePixelType, ImageDimension >, itk::VectorImage< TMovingImagePixelType, ImageDimension > > | |
static const unsigned int | FixedImageDimension |
static const unsigned int | MovingImageDimension |
Protected Attributes inherited from anima::BaseOrientedModelImageToImageMetric< itk::VectorImage< TFixedImagePixelType, ImageDimension >, itk::VectorImage< TMovingImagePixelType, ImageDimension > > | |
FixedImageConstPointer | m_FixedImage |
FixedImageMaskConstPointer | m_FixedImageMask |
InterpolatorPointer | m_Interpolator |
MovingImageConstPointer | m_MovingImage |
MovingImageMaskConstPointer | m_MovingImageMask |
unsigned long | m_NumberOfPixelsCounted |
vnl_matrix< double > | m_OrientationMatrix |
TransformPointer | m_Transform |
Tensor correlation similarity measure as defined by Taquet et al.
M. Taquet et al. "A Mathematical Framework for the Registration and Analysis of Multi-Fascicle Models for Population Studies of the Brain Microstructure". IEEE TMI 2014.
Definition at line 18 of file animaTensorCorrelationImageToImageMetric.h.
typedef itk::SmartPointer<const Self> anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::ConstPointer |
Definition at line 30 of file animaTensorCorrelationImageToImageMetric.h.
typedef itk::ContinuousIndex<double, ImageDimension> anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::ContinuousIndexType |
Definition at line 46 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::CoordinateRepresentationType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::CoordinateRepresentationType |
Definition at line 48 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::FixedImageConstPointer anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::FixedImageConstPointer |
Definition at line 53 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::FixedImageType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::FixedImageType |
Definition at line 51 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::InputPointType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::InputPointType |
Definition at line 45 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::MeasureType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::MeasureType |
Definition at line 50 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::MovingImageConstPointer anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::MovingImageConstPointer |
Definition at line 54 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::MovingImageType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::MovingImageType |
Definition at line 52 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::OutputPointType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::OutputPointType |
Definition at line 44 of file animaTensorCorrelationImageToImageMetric.h.
typedef TFixedImage::PixelType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::PixelType |
Types transferred from the base class
Definition at line 39 of file animaTensorCorrelationImageToImageMetric.h.
typedef itk::SmartPointer<Self> anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::Pointer |
Definition at line 29 of file animaTensorCorrelationImageToImageMetric.h.
typedef TensorCorrelationImageToImageMetric anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::Self |
Definition at line 27 of file animaTensorCorrelationImageToImageMetric.h.
typedef BaseOrientedModelImageToImageMetric<TFixedImage, TMovingImage > anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::Superclass |
Definition at line 28 of file animaTensorCorrelationImageToImageMetric.h.
typedef itk::VectorImage<TFixedImagePixelType, ImageDimension> anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::TFixedImage |
Standard class typedefs.
Definition at line 24 of file animaTensorCorrelationImageToImageMetric.h.
typedef itk::VectorImage<TMovingImagePixelType, ImageDimension> anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::TMovingImage |
Definition at line 25 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::TransformParametersType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::TransformParametersType |
Definition at line 43 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::TransformPointer anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::TransformPointer |
Definition at line 42 of file animaTensorCorrelationImageToImageMetric.h.
typedef Superclass::TransformType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::TransformType |
Definition at line 41 of file animaTensorCorrelationImageToImageMetric.h.
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protected |
Constructor
Definition at line 16 of file animaTensorCorrelationImageToImageMetric.hxx.
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inlineprotectedvirtual |
virtual::itk::LightObject::Pointer anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::CreateAnother | ( | void | ) | const |
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virtual |
Run-time type information (and related methods).
Reimplemented from anima::BaseOrientedModelImageToImageMetric< itk::VectorImage< TFixedImagePixelType, ImageDimension >, itk::VectorImage< TMovingImagePixelType, ImageDimension > >.
TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::MeasureType anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::GetValue | ( | const TransformParametersType & | parameters | ) | const |
Get the value for single valued optimizers.
Get the match Measure
Definition at line 33 of file animaTensorCorrelationImageToImageMetric.hxx.
References anima::ExtractPPDRotationFromJacobianMatrix(), anima::GetTensorFromVectorRepresentation(), anima::GetVectorRepresentation(), anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::PreComputeFixedValues(), and anima::RotateSymmetricMatrix().
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static |
Method for creation through the object factory.
void anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::PreComputeFixedValues | ( | ) |
Definition at line 136 of file animaTensorCorrelationImageToImageMetric.hxx.
Referenced by anima::TensorCorrelationImageToImageMetric< TFixedImagePixelType, TMovingImagePixelType, ImageDimension >::GetValue().