anima::LowMemoryPatientToGroupComparisonBridge Class Reference

#include <animaLowMemPatientToGroupComparisonBridge.h>

Public Types
typedef anima::ImageDataSplitter< InputImageType >	ImageSplitterLTType
typedef PatientToGroupComparisonImageFilter< double >::InputImageType	InputImageType
typedef anima::PatientToGroupComparisonImageFilter< double >	MainFilterType
typedef itk::Image< unsigned char, 3 >	MaskImageType
typedef PatientToGroupComparisonImageFilter< double >::OutputImageType	OutputImageType
typedef MainFilterType::TestType	TestType

Public Member Functions
void	BuildAndWrite (OutputImageType *tmpIm, std::string resName, OutputImageType::RegionType finalROI)
std::string	GetNameOfClass ()
	LowMemoryPatientToGroupComparisonBridge ()
void	SetComputationMask (std::string &cMask)
void	SetDataLTFileNames (std::string &fileList)
void	SetExplainedRatio (double eRatio)
void	SetNbSplits (unsigned int nbSplits)
void	SetNumberOfWorkUnits (unsigned int &nbT)
void	SetNumEigenValuesPCA (unsigned int numEigen)
void	SetOutputName (std::string &pref)
void	SetOutputPValName (std::string &pref)
void	SetStatisticalTestType (TestType type)
void	SetTestLTFileName (std::string &fileName)
void	Update (int specificSplitToDo=-1, bool genOutputDescriptionData=false)
	~LowMemoryPatientToGroupComparisonBridge ()

Detailed Description

Definition at line 9 of file animaLowMemPatientToGroupComparisonBridge.h.

Member Typedef Documentation

ImageSplitterLTType

typedef anima::ImageDataSplitter< InputImageType > anima::LowMemoryPatientToGroupComparisonBridge::ImageSplitterLTType

Definition at line 15 of file animaLowMemPatientToGroupComparisonBridge.h.

InputImageType

typedef PatientToGroupComparisonImageFilter<double>::InputImageType anima::LowMemoryPatientToGroupComparisonBridge::InputImageType

Definition at line 12 of file animaLowMemPatientToGroupComparisonBridge.h.

MainFilterType

typedef anima::PatientToGroupComparisonImageFilter<double> anima::LowMemoryPatientToGroupComparisonBridge::MainFilterType

Definition at line 16 of file animaLowMemPatientToGroupComparisonBridge.h.

MaskImageType

typedef itk::Image<unsigned char,3> anima::LowMemoryPatientToGroupComparisonBridge::MaskImageType

Definition at line 18 of file animaLowMemPatientToGroupComparisonBridge.h.

OutputImageType

typedef PatientToGroupComparisonImageFilter<double>::OutputImageType anima::LowMemoryPatientToGroupComparisonBridge::OutputImageType

Definition at line 13 of file animaLowMemPatientToGroupComparisonBridge.h.

TestType

typedef MainFilterType::TestType anima::LowMemoryPatientToGroupComparisonBridge::TestType

Definition at line 17 of file animaLowMemPatientToGroupComparisonBridge.h.

Constructor & Destructor Documentation

LowMemoryPatientToGroupComparisonBridge()

anima::LowMemoryPatientToGroupComparisonBridge::LowMemoryPatientToGroupComparisonBridge

(

)

Definition at line 7 of file animaLowMemPatientToGroupComparisonBridge.cxx.

References anima::PatientToGroupComparisonImageFilter< PixelScalarType >::FISHER.

~LowMemoryPatientToGroupComparisonBridge()

anima::LowMemoryPatientToGroupComparisonBridge::~LowMemoryPatientToGroupComparisonBridge

(

)

Definition at line 22 of file animaLowMemPatientToGroupComparisonBridge.cxx.

Member Function Documentation

BuildAndWrite()

void anima::LowMemoryPatientToGroupComparisonBridge::BuildAndWrite	(	OutputImageType *	tmpIm,
		std::string	resName,
		OutputImageType::RegionType	finalROI
	)

Definition at line 166 of file animaLowMemPatientToGroupComparisonBridge.cxx.

Referenced by SetNumEigenValuesPCA(), and Update().

GetNameOfClass()

std::string anima::LowMemoryPatientToGroupComparisonBridge::GetNameOfClass ( )

inline

Definition at line 23 of file animaLowMemPatientToGroupComparisonBridge.h.

References SetComputationMask().

SetComputationMask()

void anima::LowMemoryPatientToGroupComparisonBridge::SetComputationMask

(

std::string &

cMask

)

Definition at line 31 of file animaLowMemPatientToGroupComparisonBridge.cxx.

References anima::ImageDataSplitter< TInputImage >::SetComputationMask().

Referenced by GetNameOfClass(), and main().

SetDataLTFileNames()

void anima::LowMemoryPatientToGroupComparisonBridge::SetDataLTFileNames ( std::string &  fileList )

inline

Definition at line 27 of file animaLowMemPatientToGroupComparisonBridge.h.

References anima::ImageDataSplitter< TInputImage >::SetFileNames().

SetExplainedRatio()

void anima::LowMemoryPatientToGroupComparisonBridge::SetExplainedRatio ( double  eRatio )

inline

Definition at line 44 of file animaLowMemPatientToGroupComparisonBridge.h.

SetNbSplits()

void anima::LowMemoryPatientToGroupComparisonBridge::SetNbSplits ( unsigned int  nbSplits )

inline

Definition at line 40 of file animaLowMemPatientToGroupComparisonBridge.h.

SetNumberOfWorkUnits()

void anima::LowMemoryPatientToGroupComparisonBridge::SetNumberOfWorkUnits ( unsigned int &  nbT )

inline

Definition at line 41 of file animaLowMemPatientToGroupComparisonBridge.h.

SetNumEigenValuesPCA()

void anima::LowMemoryPatientToGroupComparisonBridge::SetNumEigenValuesPCA ( unsigned int  numEigen )

inline

Definition at line 45 of file animaLowMemPatientToGroupComparisonBridge.h.

References BuildAndWrite(), and Update().

SetOutputName()

void anima::LowMemoryPatientToGroupComparisonBridge::SetOutputName ( std::string &  pref )

inline

Definition at line 37 of file animaLowMemPatientToGroupComparisonBridge.h.

SetOutputPValName()

void anima::LowMemoryPatientToGroupComparisonBridge::SetOutputPValName ( std::string &  pref )

inline

Definition at line 38 of file animaLowMemPatientToGroupComparisonBridge.h.

SetStatisticalTestType()

void anima::LowMemoryPatientToGroupComparisonBridge::SetStatisticalTestType ( TestType  type )

inline

Definition at line 43 of file animaLowMemPatientToGroupComparisonBridge.h.

SetTestLTFileName()

void anima::LowMemoryPatientToGroupComparisonBridge::SetTestLTFileName ( std::string &  fileName )

inline

Definition at line 32 of file animaLowMemPatientToGroupComparisonBridge.h.

References anima::ImageDataSplitter< TInputImage >::SetUniqueFileName().

Update()

void anima::LowMemoryPatientToGroupComparisonBridge::Update	(	int	specificSplitToDo = -1,
		bool	genOutputDescriptionData = false
	)

Definition at line 39 of file animaLowMemPatientToGroupComparisonBridge.cxx.

References BuildAndWrite(), anima::ImageDataSplitter< TInputImage >::EmptyMask(), anima::ImageDataSplitter< TInputImage >::GetBlockRegionInsideMargin(), anima::ImageDataSplitter< TInputImage >::GetNbImages(), anima::ImageDataSplitter< TInputImage >::GetOutput(), anima::ImageDataSplitter< TInputImage >::GetSmallMaskWithMargin(), anima::ImageDataSplitter< TInputImage >::GetSpecificBlockRegion(), anima::PatientToGroupComparisonImageFilter< PixelScalarType >::New(), anima::ImageDataSplitter< TInputImage >::SetBlockIndex(), anima::ImageDataSplitter< TInputImage >::SetNumberOfBlocks(), and anima::ImageDataSplitter< TInputImage >::Update().

Referenced by SetNumEigenValuesPCA().

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The documentation for this class was generated from the following files:

• animaLowMemPatientToGroupComparisonBridge.h
• animaLowMemPatientToGroupComparisonBridge.cxx