ANIMA  4.0
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | List of all members
anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType > Class Template Reference

#include <animaGammaMixtureT2RelaxometryEstimationImageFilter.h>

+ Inheritance diagram for anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >:
+ Collaboration diagram for anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >:

Public Types

typedef itk::SmartPointer< const SelfConstPointer
 
typedef InputImageType::IndexType IndexType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef Superclass::InputImageRegionType InputImageRegionType
 
typedef TInputImage InputImageType
 
typedef Superclass::MaskImageType MaskImageType
 
typedef OutputImageType::Pointer OutputImagePointer
 
typedef Superclass::OutputImageRegionType OutputImageRegionType
 
typedef TOutputImage OutputImageType
 
typedef VectorOutputImageType::PixelType OutputVectorType
 
typedef itk::SmartPointer< SelfPointer
 
typedef GammaMixtureT2RelaxometryEstimationImageFilter Self
 
typedef anima::MaskedImageToImageFilter< TInputImage, TOutputImageSuperclass
 
typedef itk::Image< TPixelScalarType, 3 > TInputImage
 
typedef itk::Image< TPixelScalarType, 3 > TOutputImage
 
typedef VectorOutputImageType::Pointer VectorOutputImagePointer
 
typedef itk::VectorImage< TPixelScalarType, 3 > VectorOutputImageType
 
- Public Types inherited from anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass::InputImageRegionType InputImageRegionType
 
typedef MaskImageType::Pointer MaskImagePointer
 
typedef itk::Image< unsigned char, itk::Image< TPixelScalarType, 3 > ::ImageDimension > MaskImageType
 
typedef MaskImageType::IndexType MaskIndexType
 
typedef MaskImageType::RegionType MaskRegionType
 
typedef MaskImageType::SizeType MaskSizeType
 
typedef Superclass::OutputImageRegionType OutputImageRegionType
 
typedef itk::SmartPointer< SelfPointer
 
typedef MaskedImageToImageFilter Self
 
typedef anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > Superclass
 
typedef itk::ImageSource< itk::Image< TPixelScalarType, 3 > >::ThreadStruct ThreadStruct
 
- Public Types inherited from anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass::OutputImageRegionType OutputImageRegionType
 
typedef itk::SmartPointer< SelfPointer
 
typedef NumberedThreadImageToImageFilter Self
 
typedef itk::ImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > Superclass
 
typedef itk::ImageSource< itk::Image< TPixelScalarType, 3 > >::ThreadStruct ThreadStruct
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
InputImageTypeGetB1OutputImage ()
 
InputImageTypeGetM0OutputImage ()
 
VectorOutputImageTypeGetMeanParamImage ()
 
InputImageTypeGetMWFOutputImage ()
 
virtual const char * GetNameOfClass () const
 
InputImageTypeGetSigmaSquareOutputImage ()
 
InputImageTypeGetT1Map ()
 
VectorOutputImageTypeGetWeightsImage ()
 
virtual void SetAverageSignalThreshold (double _arg)
 
virtual void SetConstrainedParameters (bool _arg)
 
virtual void SetEchoSpacing (double _arg)
 
virtual void SetGammaIntegralTolerance (double _arg)
 
void SetT1Map (InputImageType *map)
 
virtual void SetT2ExcitationFlipAngle (double _arg)
 
void SetT2FlipAngles (std::vector< double > &flipAngles)
 
void SetT2FlipAngles (double singleAngle, unsigned int numAngles)
 
- Public Member Functions inherited from anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
virtual MaskImageTypeGetComputationMask ()
 
virtual void SetComputationMask (MaskImagePointer _arg)
 
- Public Member Functions inherited from anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
virtual OutputImageRegionType GetComputationRegion ()
 
virtual void SetComputationRegion (OutputImageRegionType _arg)
 
virtual void SetNumberOfPointsToProcess (unsigned int _arg)
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
static Pointer New ()
 
- Static Public Member Functions inherited from anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
static Pointer New ()
 

Protected Member Functions

void BeforeThreadedGenerateData () ITK_OVERRIDE
 
void CheckComputationMask () ITK_OVERRIDE
 
void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread) ITK_OVERRIDE
 
 GammaMixtureT2RelaxometryEstimationImageFilter ()
 
virtual ~GammaMixtureT2RelaxometryEstimationImageFilter ()
 
- Protected Member Functions inherited from anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
void InitializeComputationRegionFromMask ()
 
 MaskedImageToImageFilter ()
 
virtual ~MaskedImageToImageFilter ()
 
- Protected Member Functions inherited from anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
virtual void GenerateData () ITK_OVERRIDE
 
unsigned int GetSafeThreadId ()
 
void IncrementNumberOfProcessedPoints ()
 
void InitializeZeroPixel (itk::Image< TPixelScalarType, 3 > *image, itk::VariableLengthVector< ScalarRealType > &zeroPixel)
 Utility function to initialize output images pixel to zero for vector images. More...
 
void InitializeZeroPixel (itk::Image< TPixelScalarType, 3 > *, PixelType &zeroPixel)
 Utility function to initialize output images pixel to zero for all images except vector images. More...
 
 NumberedThreadImageToImageFilter ()
 
void SafeReleaseThreadId (unsigned int threadId)
 
virtual void ThreadProcessSlices ()
 
virtual ~NumberedThreadImageToImageFilter ()
 

Additional Inherited Members

- Static Public Attributes inherited from anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
static constexpr unsigned int OutputImageDimension
 
- Static Protected Member Functions inherited from anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderMultiSplitCallback (void *arg)
 

Detailed Description

template<class TPixelScalarType>
class anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >

Definition at line 11 of file animaGammaMixtureT2RelaxometryEstimationImageFilter.h.

Member Typedef Documentation

◆ ConstPointer

template<class TPixelScalarType >
typedef itk::SmartPointer<const Self> anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::ConstPointer

◆ IndexType

template<class TPixelScalarType >
typedef InputImageType::IndexType anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::IndexType

◆ InputImagePointer

template<class TPixelScalarType >
typedef InputImageType::Pointer anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::InputImagePointer

◆ InputImageRegionType

◆ InputImageType

template<class TPixelScalarType >
typedef TInputImage anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::InputImageType

Image typedef support

Definition at line 30 of file animaGammaMixtureT2RelaxometryEstimationImageFilter.h.

◆ MaskImageType

template<class TPixelScalarType >
typedef Superclass::MaskImageType anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::MaskImageType

Superclass typedefs.

Definition at line 40 of file animaGammaMixtureT2RelaxometryEstimationImageFilter.h.

◆ OutputImagePointer

template<class TPixelScalarType >
typedef OutputImageType::Pointer anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::OutputImagePointer

◆ OutputImageRegionType

◆ OutputImageType

template<class TPixelScalarType >
typedef TOutputImage anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::OutputImageType

◆ OutputVectorType

template<class TPixelScalarType >
typedef VectorOutputImageType::PixelType anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::OutputVectorType

◆ Pointer

template<class TPixelScalarType >
typedef itk::SmartPointer<Self> anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::Pointer

◆ Self

Standard class typedefs.

Definition at line 16 of file animaGammaMixtureT2RelaxometryEstimationImageFilter.h.

◆ Superclass

◆ TInputImage

template<class TPixelScalarType >
typedef itk::Image<TPixelScalarType, 3> anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::TInputImage

◆ TOutputImage

template<class TPixelScalarType >
typedef itk::Image<TPixelScalarType, 3> anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::TOutputImage

◆ VectorOutputImagePointer

template<class TPixelScalarType >
typedef VectorOutputImageType::Pointer anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::VectorOutputImagePointer

◆ VectorOutputImageType

template<class TPixelScalarType >
typedef itk::VectorImage<TPixelScalarType, 3> anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::VectorOutputImageType

Constructor & Destructor Documentation

◆ GammaMixtureT2RelaxometryEstimationImageFilter()

template<class TPixelScalarType >
anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GammaMixtureT2RelaxometryEstimationImageFilter ( )
inlineprotected

◆ ~GammaMixtureT2RelaxometryEstimationImageFilter()

template<class TPixelScalarType >
virtual anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::~GammaMixtureT2RelaxometryEstimationImageFilter ( )
inlineprotectedvirtual

Member Function Documentation

◆ BeforeThreadedGenerateData()

template<class TPixelScalarType >
void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::BeforeThreadedGenerateData ( )
protectedvirtual

◆ CheckComputationMask()

template<class TPixelScalarType >
void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::CheckComputationMask ( )
protectedvirtual

◆ CreateAnother()

template<class TPixelScalarType >
virtual::itk::LightObject::Pointer anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::CreateAnother ( void  ) const

◆ DynamicThreadedGenerateData()

template<class TPixelScalarType >
void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::DynamicThreadedGenerateData ( const OutputImageRegionType outputRegionForThread)
protected

◆ GetB1OutputImage()

template<class TPixelScalarType >
InputImageType* anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GetB1OutputImage ( )
inline

◆ GetM0OutputImage()

template<class TPixelScalarType >
InputImageType* anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GetM0OutputImage ( )
inline

◆ GetMeanParamImage()

template<class TPixelScalarType >
VectorOutputImageType* anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GetMeanParamImage ( )
inline

◆ GetMWFOutputImage()

template<class TPixelScalarType >
InputImageType* anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GetMWFOutputImage ( )
inline

◆ GetNameOfClass()

template<class TPixelScalarType >
virtual const char* anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods)

Reimplemented from anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > >.

◆ GetSigmaSquareOutputImage()

template<class TPixelScalarType >
InputImageType* anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GetSigmaSquareOutputImage ( )
inline

◆ GetT1Map()

template<class TPixelScalarType >
InputImageType* anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GetT1Map ( )
inline

◆ GetWeightsImage()

template<class TPixelScalarType >
VectorOutputImageType* anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::GetWeightsImage ( )
inline

◆ New()

template<class TPixelScalarType >
static Pointer anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::New ( )
static

Method for creation through the object factory.

◆ SetAverageSignalThreshold()

template<class TPixelScalarType >
virtual void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::SetAverageSignalThreshold ( double  _arg)
virtual

◆ SetConstrainedParameters()

template<class TPixelScalarType >
virtual void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::SetConstrainedParameters ( bool  _arg)
virtual

◆ SetEchoSpacing()

template<class TPixelScalarType >
virtual void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::SetEchoSpacing ( double  _arg)
virtual

◆ SetGammaIntegralTolerance()

template<class TPixelScalarType >
virtual void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::SetGammaIntegralTolerance ( double  _arg)
virtual

◆ SetT1Map()

template<class TPixelScalarType >
void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::SetT1Map ( InputImageType map)
inline

◆ SetT2ExcitationFlipAngle()

template<class TPixelScalarType >
virtual void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::SetT2ExcitationFlipAngle ( double  _arg)
virtual

◆ SetT2FlipAngles() [1/2]

template<class TPixelScalarType >
void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::SetT2FlipAngles ( std::vector< double > &  flipAngles)
inline

◆ SetT2FlipAngles() [2/2]

template<class TPixelScalarType >
void anima::GammaMixtureT2RelaxometryEstimationImageFilter< TPixelScalarType >::SetT2FlipAngles ( double  singleAngle,
unsigned int  numAngles 
)
inline

The documentation for this class was generated from the following files: