| BaseCompartment() | anima::BaseCompartment | inlineprotected |
| BaseIsotropicCompartment() | anima::BaseIsotropicCompartment | inlineprotected |
| BasePointer typedef | anima::StationaryWaterCompartment | |
| ConstPointer typedef | anima::StationaryWaterCompartment | |
| CopyFromOther(Self *rhs) | anima::BaseCompartment | virtual |
| CreateAnother(void) const | anima::StationaryWaterCompartment | |
| GetApparentFractionalAnisotropy() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetApparentMeanDiffusivity() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetApparentParallelDiffusivity() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetApparentPerpendicularDiffusivity() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetAxialDiffusivity() | anima::BaseCompartment | inlinevirtual |
| GetCompartmentSize() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetCompartmentType() ITK_OVERRIDE | anima::StationaryWaterCompartment | inlinevirtual |
| GetCompartmentVector() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetDiffusionTensor() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetEstimateAxialDiffusivity() | anima::BaseIsotropicCompartment | inline |
| GetExtraAxonalFraction() | anima::BaseCompartment | inlinevirtual |
| GetFourierTransformedDiffusionProfile(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient) ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetLogDiffusionProfile(const Vector3DType &sample) ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetNameOfClass() const | anima::StationaryWaterCompartment | virtual |
| GetNumberOfParameters() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetOrientationConcentration() | anima::BaseCompartment | inlinevirtual |
| GetOrientationPhi() | anima::BaseCompartment | inlinevirtual |
| GetOrientationTheta() | anima::BaseCompartment | inlinevirtual |
| GetParameterLowerBounds() ITK_OVERRIDE | anima::StationaryWaterCompartment | virtual |
| GetParametersAsVector() ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetParameterUpperBounds() ITK_OVERRIDE | anima::StationaryWaterCompartment | virtual |
| GetPerpendicularAngle() | anima::BaseCompartment | inlinevirtual |
| GetPredictedSignal(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient) | anima::BaseCompartment | |
| GetRadialDiffusivity1() | anima::BaseCompartment | inlinevirtual |
| GetRadialDiffusivity2() | anima::BaseCompartment | inlinevirtual |
| GetSignalAttenuationJacobian(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient) ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| GetTensorCompatible() | anima::BaseCompartment | inlinevirtual |
| GetTissueRadius() | anima::BaseCompartment | inlinevirtual |
| IsEqual(Self *rhs, double tolerance=1.0e-2, double absoluteTolerance=1.0e-8) | anima::BaseCompartment | virtual |
| ListType typedef | anima::BaseCompartment | |
| m_CompartmentVector | anima::BaseCompartment | protected |
| m_JacobianVector | anima::BaseCompartment | protected |
| m_ParametersLowerBoundsVector | anima::BaseCompartment | protected |
| m_ParametersUpperBoundsVector | anima::BaseCompartment | protected |
| m_ParametersVector | anima::BaseCompartment | protected |
| m_SpaceDimension | anima::BaseCompartment | protectedstatic |
| Matrix3DType typedef | anima::BaseIsotropicCompartment | |
| ModelOutputVectorType typedef | anima::BaseIsotropicCompartment | |
| New() | anima::StationaryWaterCompartment | static |
| Pointer typedef | anima::StationaryWaterCompartment | |
| Reorient(vnl_matrix< double > &orientationMatrix, bool affineTransform) ITK_OVERRIDE | anima::BaseIsotropicCompartment | inlinevirtual |
| Self typedef | anima::StationaryWaterCompartment | |
| SetAxialDiffusivity(double num) | anima::BaseCompartment | inlinevirtual |
| SetCompartmentVector(ModelOutputVectorType &compartmentVector) ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| SetEstimateAxialDiffusivity(bool arg) | anima::BaseIsotropicCompartment | |
| SetExtraAxonalFraction(double num) | anima::BaseCompartment | inlinevirtual |
| SetOrientationConcentration(double num) | anima::BaseCompartment | inlinevirtual |
| SetOrientationPhi(double num) | anima::BaseCompartment | inlinevirtual |
| SetOrientationTheta(double num) | anima::BaseCompartment | inlinevirtual |
| SetParametersFromVector(const ListType ¶ms) ITK_OVERRIDE | anima::BaseIsotropicCompartment | virtual |
| SetPerpendicularAngle(double num) | anima::BaseCompartment | inlinevirtual |
| SetRadialDiffusivity1(double num) | anima::BaseCompartment | inlinevirtual |
| SetRadialDiffusivity2(double num) | anima::BaseCompartment | inlinevirtual |
| SetTissueRadius(double num) | anima::BaseCompartment | inlinevirtual |
| StationaryWaterCompartment() | anima::StationaryWaterCompartment | inlineprotected |
| Superclass typedef | anima::StationaryWaterCompartment | |
| Vector3DType typedef | anima::BaseIsotropicCompartment | |
| ~BaseCompartment() | anima::BaseCompartment | inlineprotectedvirtual |
| ~BaseIsotropicCompartment() | anima::BaseIsotropicCompartment | inlineprotectedvirtual |
| ~StationaryWaterCompartment() | anima::StationaryWaterCompartment | inlineprotectedvirtual |
