ANIMA  4.0
anima::NODDICompartment Member List

This is the complete list of members for anima::NODDICompartment, including all inherited members.

BaseCompartment()anima::BaseCompartmentinlineprotected
BasePointer typedefanima::NODDICompartment
ConstPointer typedefanima::NODDICompartment
CopyFromOther(Self *rhs)anima::BaseCompartmentvirtual
CreateAnother(void) constanima::NODDICompartment
GetApparentFractionalAnisotropy() ITK_OVERRIDEanima::NODDICompartmentvirtual
GetApparentMeanDiffusivity()anima::BaseCompartmentvirtual
GetApparentParallelDiffusivity()anima::BaseCompartmentvirtual
GetApparentPerpendicularDiffusivity()anima::BaseCompartmentvirtual
GetAxialDiffusivity()anima::BaseCompartmentinlinevirtual
GetCompartmentSize() ITK_OVERRIDEanima::NODDICompartmentvirtual
GetCompartmentType() ITK_OVERRIDEanima::NODDICompartmentinlinevirtual
GetCompartmentVector() ITK_OVERRIDEanima::NODDICompartmentvirtual
GetDiffusionTensor() ITK_OVERRIDEanima::NODDICompartmentvirtual
GetExtraAxonalFraction()anima::BaseCompartmentinlinevirtual
GetFourierTransformedDiffusionProfile(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient) ITK_OVERRIDEanima::NODDICompartmentvirtual
GetLogDiffusionProfile(const Vector3DType &sample) ITK_OVERRIDEanima::NODDICompartmentvirtual
GetNameOfClass() constanima::NODDICompartmentvirtual
GetNumberOfParameters() ITK_OVERRIDEanima::NODDICompartmentvirtual
GetOrientationConcentration()anima::BaseCompartmentinlinevirtual
GetOrientationPhi()anima::BaseCompartmentinlinevirtual
GetOrientationTheta()anima::BaseCompartmentinlinevirtual
GetParameterLowerBounds() ITK_OVERRIDEanima::NODDICompartmentvirtual
GetParametersAsVector() ITK_OVERRIDEanima::NODDICompartmentvirtual
GetParameterUpperBounds() ITK_OVERRIDEanima::NODDICompartmentvirtual
GetPerpendicularAngle()anima::BaseCompartmentinlinevirtual
GetPredictedSignal(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient)anima::BaseCompartment
GetRadialDiffusivity1()anima::BaseCompartmentinlinevirtual
GetRadialDiffusivity2()anima::BaseCompartmentinlinevirtual
GetSignalAttenuationJacobian(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient) ITK_OVERRIDEanima::NODDICompartmentvirtual
GetTensorCompatible() ITK_OVERRIDEanima::NODDICompartmentinlinevirtual
GetTissueRadius()anima::BaseCompartmentinlinevirtual
IsEqual(Self *rhs, double tolerance=1.0e-2, double absoluteTolerance=1.0e-8)anima::BaseCompartmentvirtual
ListType typedefanima::BaseCompartment
m_CompartmentVectoranima::BaseCompartmentprotected
m_DiffusionTensoranima::BaseCompartmentprotected
m_JacobianVectoranima::BaseCompartmentprotected
m_ParametersLowerBoundsVectoranima::BaseCompartmentprotected
m_ParametersUpperBoundsVectoranima::BaseCompartmentprotected
m_ParametersVectoranima::BaseCompartmentprotected
m_SpaceDimensionanima::BaseCompartmentprotectedstatic
Matrix3DType typedefanima::NODDICompartment
ModelOutputVectorType typedefanima::NODDICompartment
New()anima::NODDICompartmentstatic
NODDICompartment()anima::NODDICompartmentinlineprotected
Pointer typedefanima::NODDICompartment
Reorient(vnl_matrix< double > &orientationMatrix, bool affineTransform)anima::BaseCompartmentvirtual
Self typedefanima::NODDICompartment
SetAxialDiffusivity(double num) ITK_OVERRIDEanima::NODDICompartmentvirtual
SetCompartmentVector(ModelOutputVectorType &compartmentVector) ITK_OVERRIDEanima::NODDICompartmentvirtual
SetEstimateAxialDiffusivity(bool arg)anima::NODDICompartment
SetEstimateExtraAxonalFraction(bool arg)anima::NODDICompartment
SetEstimateOrientationConcentration(bool arg)anima::NODDICompartment
SetExtraAxonalFraction(double num) ITK_OVERRIDEanima::NODDICompartmentvirtual
SetOrientationConcentration(double num) ITK_OVERRIDEanima::NODDICompartmentvirtual
SetOrientationPhi(double num) ITK_OVERRIDEanima::NODDICompartmentvirtual
SetOrientationTheta(double num) ITK_OVERRIDEanima::NODDICompartmentvirtual
SetParametersFromVector(const ListType &params) ITK_OVERRIDEanima::NODDICompartmentvirtual
SetPerpendicularAngle(double num)anima::BaseCompartmentinlinevirtual
SetRadialDiffusivity1(double num)anima::BaseCompartmentinlinevirtual
SetRadialDiffusivity2(double num)anima::BaseCompartmentinlinevirtual
SetTissueRadius(double num)anima::BaseCompartmentinlinevirtual
Superclass typedefanima::NODDICompartment
UpdateKappaValues()anima::NODDICompartmentprotected
UpdateSignals(double bValue, const Vector3DType &gradient)anima::NODDICompartmentprotected
Vector3DType typedefanima::NODDICompartment
~BaseCompartment()anima::BaseCompartmentinlineprotectedvirtual
~NODDICompartment()anima::NODDICompartmentinlineprotectedvirtual