| BeforeThreadedGenerateData() ITK_OVERRIDE | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | protectedvirtual |
| CheckComputationMask() ITK_OVERRIDE | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | protectedvirtual |
| ComputeTikhonovPrior(const IndexType &refIndex, OutputVectorType &refDistribution, PatchSearcherType &nlPatchSearcher, T2VectorType &priorDistribution, std::vector< double > &workDataWeights, std::vector< OutputVectorType > &workDataSamples) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | protected |
| ComputeTikhonovRegularizedSolution(anima::NNLSOptimizer *nnlsOpt, DataMatrixType &AMatrix, T2VectorType &signalValues, double lambdaSq, T2VectorType &priorDistribution, T2VectorType &t2OptimizedWeights) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | protected |
| ConstPointer typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| CreateAnother(void) const | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| DataMatrixType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| DynamicThreadedGenerateData(const OutputImageRegionType &outputRegionForThread) ITK_OVERRIDE | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | protected |
| GenerateData() ITK_OVERRIDE | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | protectedvirtual |
| GetB1OutputImage() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| GetComputationMask() | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | virtual |
| GetComputationRegion() | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | virtual |
| GetCostOutputImage() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| GetM0OutputImage() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| GetMWFOutputImage() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| GetNameOfClass() const | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| GetSafeThreadId() | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | protected |
| GetT1Map() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| GetT2OutputImage() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| IncrementNumberOfProcessedPoints() | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | protected |
| IndexType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| InitializeComputationRegionFromMask() | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | protected |
| InitializeZeroPixel(itk::Image< TPixelScalarType, 3 > *image, itk::VariableLengthVector< ScalarRealType > &zeroPixel) | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | inlineprotected |
| InitializeZeroPixel(itk::Image< TPixelScalarType, 3 > *, PixelType &zeroPixel) | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | inlineprotected |
| InputImagePointer typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| InputImageRegionType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| InputImageType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| MaskedImageToImageFilter() | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | inlineprotected |
| MaskImagePointer typedef | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | |
| MaskImageType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| MaskIndexType typedef | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | |
| MaskRegionType typedef | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | |
| MaskSizeType typedef | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | |
| MultiT2RelaxometryEstimationImageFilter() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inlineprotected |
| New() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | static |
| NNLSOptimizerPointer typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| NNLSOptimizerType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| NumberedThreadImageToImageFilter() | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | inlineprotected |
| OutputImageDimension | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | static |
| OutputImagePointer typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| OutputImageRegionType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| OutputImageType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| OutputVectorType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| PatchSearcherType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| Pointer typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| PrepareNLPatchSearchers() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | protected |
| SafeReleaseThreadId(unsigned int threadId) | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | protected |
| Self typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| SetAverageSignalThreshold(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetB1MaximumOptimizerIterations(unsigned int _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetB1OptimizerInitialStep(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetB1OptimizerStopCondition(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetB1Tolerance(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetBetaParameter(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetComputationMask(MaskImagePointer _arg) | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | virtual |
| SetComputationRegion(OutputImageRegionType _arg) | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | virtual |
| SetEchoSpacing(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetInitialB1Map(InputImageType *_arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetInitialM0Map(InputImageType *_arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetInitialT2Map(VectorOutputImageType *_arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetLowerT2Bound(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetMeanMinThreshold(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetMyelinThreshold(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetNLEstimation(bool _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetNumberOfPointsToProcess(unsigned int _arg) | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | virtual |
| SetNumberOfT2Compartments(unsigned int _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetPatchHalfSize(unsigned int _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetRegularizationIntensity(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetSearchNeighborhood(unsigned int _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetSearchStepSize(unsigned int _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetT1Map(InputImageType *map) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| SetT2ExcitationFlipAngle(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetT2FlipAngles(std::vector< double > &flipAngles) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| SetT2FlipAngles(double singleAngle, unsigned int numAngles) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inline |
| SetUpperT2Bound(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetVarMinThreshold(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| SetWeightThreshold(double _arg) | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | virtual |
| Superclass typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| T2VectorType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| ThreaderMultiSplitCallback(void *arg) | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | protectedstatic |
| ThreadProcessSlices() | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | protectedvirtual |
| ThreadStruct typedef | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | |
| TInputImage typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| TOutputImage typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| VectorOutputImagePointer typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| VectorOutputImageType typedef | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | |
| ~MaskedImageToImageFilter() | anima::MaskedImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | inlineprotectedvirtual |
| ~MultiT2RelaxometryEstimationImageFilter() | anima::MultiT2RelaxometryEstimationImageFilter< TPixelScalarType > | inlineprotectedvirtual |
| ~NumberedThreadImageToImageFilter() | anima::NumberedThreadImageToImageFilter< itk::Image< TPixelScalarType, 3 >, itk::Image< TPixelScalarType, 3 > > | inlineprotectedvirtual |
