ANIMA  4.0
anima::BaseIsotropicCompartment Member List

This is the complete list of members for anima::BaseIsotropicCompartment, including all inherited members.

BaseCompartment()anima::BaseCompartmentinlineprotected
BaseIsotropicCompartment()anima::BaseIsotropicCompartmentinlineprotected
BasePointer typedefanima::BaseIsotropicCompartment
ConstPointer typedefanima::BaseIsotropicCompartment
CopyFromOther(Self *rhs)anima::BaseCompartmentvirtual
GetApparentFractionalAnisotropy() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetApparentMeanDiffusivity() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetApparentParallelDiffusivity() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetApparentPerpendicularDiffusivity() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetAxialDiffusivity()anima::BaseCompartmentinlinevirtual
GetCompartmentSize() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetCompartmentType()=0anima::BaseCompartmentpure virtual
GetCompartmentVector() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetDiffusionTensor() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetEstimateAxialDiffusivity()anima::BaseIsotropicCompartmentinline
GetExtraAxonalFraction()anima::BaseCompartmentinlinevirtual
GetFourierTransformedDiffusionProfile(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient) ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetLogDiffusionProfile(const Vector3DType &sample) ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetNameOfClass() constanima::BaseIsotropicCompartmentvirtual
GetNumberOfParameters() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetOrientationConcentration()anima::BaseCompartmentinlinevirtual
GetOrientationPhi()anima::BaseCompartmentinlinevirtual
GetOrientationTheta()anima::BaseCompartmentinlinevirtual
GetParameterLowerBounds()=0anima::BaseCompartmentpure virtual
GetParametersAsVector() ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetParameterUpperBounds()=0anima::BaseCompartmentpure virtual
GetPerpendicularAngle()anima::BaseCompartmentinlinevirtual
GetPredictedSignal(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient)anima::BaseCompartment
GetRadialDiffusivity1()anima::BaseCompartmentinlinevirtual
GetRadialDiffusivity2()anima::BaseCompartmentinlinevirtual
GetSignalAttenuationJacobian(double smallDelta, double bigDelta, double gradientStrength, const Vector3DType &gradient) ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
GetTensorCompatible()anima::BaseCompartmentinlinevirtual
GetTissueRadius()anima::BaseCompartmentinlinevirtual
IsEqual(Self *rhs, double tolerance=1.0e-2, double absoluteTolerance=1.0e-8)anima::BaseCompartmentvirtual
ListType typedefanima::BaseCompartment
m_CompartmentVectoranima::BaseCompartmentprotected
m_JacobianVectoranima::BaseCompartmentprotected
m_ParametersLowerBoundsVectoranima::BaseCompartmentprotected
m_ParametersUpperBoundsVectoranima::BaseCompartmentprotected
m_ParametersVectoranima::BaseCompartmentprotected
m_SpaceDimensionanima::BaseCompartmentprotectedstatic
Matrix3DType typedefanima::BaseIsotropicCompartment
ModelOutputVectorType typedefanima::BaseIsotropicCompartment
Pointer typedefanima::BaseIsotropicCompartment
Reorient(vnl_matrix< double > &orientationMatrix, bool affineTransform) ITK_OVERRIDEanima::BaseIsotropicCompartmentinlinevirtual
Self typedefanima::BaseIsotropicCompartment
SetAxialDiffusivity(double num)anima::BaseCompartmentinlinevirtual
SetCompartmentVector(ModelOutputVectorType &compartmentVector) ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
SetEstimateAxialDiffusivity(bool arg)anima::BaseIsotropicCompartment
SetExtraAxonalFraction(double num)anima::BaseCompartmentinlinevirtual
SetOrientationConcentration(double num)anima::BaseCompartmentinlinevirtual
SetOrientationPhi(double num)anima::BaseCompartmentinlinevirtual
SetOrientationTheta(double num)anima::BaseCompartmentinlinevirtual
SetParametersFromVector(const ListType &params) ITK_OVERRIDEanima::BaseIsotropicCompartmentvirtual
SetPerpendicularAngle(double num)anima::BaseCompartmentinlinevirtual
SetRadialDiffusivity1(double num)anima::BaseCompartmentinlinevirtual
SetRadialDiffusivity2(double num)anima::BaseCompartmentinlinevirtual
SetTissueRadius(double num)anima::BaseCompartmentinlinevirtual
Superclass typedefanima::BaseIsotropicCompartment
Vector3DType typedefanima::BaseIsotropicCompartment
~BaseCompartment()anima::BaseCompartmentinlineprotectedvirtual
~BaseIsotropicCompartment()anima::BaseIsotropicCompartmentinlineprotectedvirtual