animaVectorImagePatchStatistics.hxx File Reference

#include "animaVectorImagePatchStatistics.h"
#include <itkImageRegionConstIteratorWithIndex.h>
#include <itkSymmetricEigenAnalysis.h>

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Namespaces
	anima

Functions
template<class T1 , class T2 , unsigned int Dimension>
void	anima::computeAverageLocalCovariance (vnl_matrix< T2 > &resVariance, itk::VectorImage< T1, Dimension > *inputImage, itk::Image< unsigned char, Dimension > *maskImage, const itk::ImageRegion< Dimension > &averagingRegion, int localNeighborhood)
	Noise estimation for a patch of a vector image. More...
template<class T1 , class T2 , unsigned int Dimension>
unsigned int	anima::computePatchMeanAndCovariance (const itk::VectorImage< T1, Dimension > *inputImage, const itk::ImageRegion< Dimension > &patchRegion, itk::VariableLengthVector< T2 > &patchMean, vnl_matrix< T2 > &patchCov)
	Computes the average and covariance matrix from a patch of a vector image. More...
template<class T >
double	anima::VectorCovarianceTest (vnl_matrix< T > &logRefPatchCov, vnl_matrix< T > &movingPatchCov)
	Test if covariance matrices are different (returns distance) More...
template<class T >
double	anima::VectorMeansTest (itk::VariableLengthVector< T > &refPatchMean, itk::VariableLengthVector< T > &movingPatchMean, const unsigned int &refPatchNumElts, const unsigned int &movingPatchNumElts, vnl_matrix< T > &refPatchCov, vnl_matrix< T > &movingPatchCov)
	Test if vector means are different (returns distance) More...