animaBaseTensorTools.h File Reference

#include <itkMatrix.h>
#include <vnl/vnl_matrix.h>
#include <vnl/vnl_diag_matrix.h>
#include <itkVariableLengthVector.h>
#include <itkMatrixOffsetTransformBase.h>
#include <itkSymmetricEigenAnalysis.h>
#include "animaBaseTensorTools.hxx"

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Classes
class	anima::LogEuclideanTensorCalculator< TScalarType >

Namespaces
	anima

Functions
template<typename RealType , typename MatrixType >
void	anima::ExtractPPDRotationFromJacobianMatrix (vnl_matrix< RealType > &jacobianMatrix, vnl_matrix< RealType > &rotationMatrix, MatrixType &eigenVectors)
template<typename RealType >
void	anima::ExtractRotationFromJacobianMatrix (vnl_matrix< RealType > &jacobianMatrix, vnl_matrix< RealType > &rotationMatrix, vnl_matrix< RealType > &tmpMat)
template<class T1 , class T2 >
void	anima::GetTensorFromVectorRepresentation (const itk::VariableLengthVector< T1 > &vector, vnl_matrix< T2 > &tensor, unsigned int tensDim=0, bool scale=false)
template<class T1 , class T2 >
void	anima::GetVectorRepresentation (const vnl_matrix< T1 > &tensor, itk::VariableLengthVector< T2 > &vector, unsigned int vecDim=0, bool scale=false)
template<class T1 >
double	anima::ovlScore (vnl_diag_matrix< T1 > &eigsX, vnl_matrix< T1 > &eigVecsX, vnl_diag_matrix< T1 > &eigsY, vnl_matrix< T1 > &eigVecsY)
template<class T >
void	anima::ProjectOnTensorSpace (const vnl_matrix< T > &matrix, vnl_matrix< T > &tensor)
template<class T1 , class T2 >
void	anima::RecomposeTensor (vnl_diag_matrix< T1 > &eigs, vnl_matrix< T1 > &eigVecs, vnl_matrix< T2 > &resMatrix)
	Recompose tensor from values extracted using SymmetricEigenAnalysis (vnl_symmetric_eigensystem transposes all this) More...
template<class T1 , class T2 , class T3 >
void	anima::RotateSymmetricMatrix (T1 &tensor, T2 &rotationMatrix, T3 &rotated_tensor, unsigned int tensorDim)
	Rotates a symmetric matrix by performing R^T D R where R is a rotation matrix and D the symmetric matrix. More...
template<class T1 , class T2 >
void	anima::RotateSymmetricMatrix (vnl_matrix< T1 > &tensor, vnl_matrix< T2 > &rotationMatrix, vnl_matrix< T2 > &rotated_tensor)
template<class T1 , class T2 , unsigned int NDim>
void	anima::RotateSymmetricMatrix (itk::Matrix< T1, NDim, NDim > &tensor, itk::Matrix< T2, NDim, NDim > &rotationMatrix, itk::Matrix< T2, NDim, NDim > &rotated_tensor)